chore(deps): Support Python 3.13 and drop 3.9

Closes #3037

requirements/common-constraints.txt

@@ -282,7 +282,7 @@ nltk==3.9.1
     # via llama-index-core
 nodeenv==1.9.1
     # via pre-commit
-numpy==1.26.4
+numpy==2.2.4
     # via
     #   -r requirements/requirements-help.in
     #   contourpy
@@ -295,7 +295,7 @@ numpy==1.26.4
     #   soundfile
     #   streamlit
     #   transformers
-openai==1.75.0
+openai==1.76.0
     # via litellm
 oslex==0.1.3
     # via -r requirements/requirements.in
@@ -529,7 +529,7 @@ tokenizers==0.21.1
     #   transformers
 toml==0.10.2
     # via streamlit
-torch==2.2.2
+torch==2.6.0
     # via
     #   -r requirements/requirements-help.in
     #   sentence-transformers
@@ -561,7 +561,6 @@ typer==0.15.3
 typing-extensions==4.13.2
     # via
     #   altair
-    #   anyio
     #   beautifulsoup4
     #   google-generativeai
     #   huggingface-hub
@@ -570,7 +569,6 @@ typing-extensions==4.13.2
     #   pydantic
     #   pydantic-core
     #   pyee
-    #   referencing
     #   sentence-transformers
     #   sqlalchemy
     #   streamlit
@@ -610,3 +608,7 @@ yarl==1.20.0
     # via aiohttp
 zipp==3.21.0
     # via importlib-metadata
+
+# The following packages are considered to be unsafe in a requirements file:
+# pip
+# setuptools

requirements/pydub.in

@@ -0,0 +1,2 @@
+# Remove if Python 3.13 support https://github.com/jiaaro/pydub/pull/816 gets released
+audioop-lts>=0.2.1; python_version >= "3.13"

requirements/requirements-browser.txt

@@ -62,7 +62,7 @@ narwhals==1.38.2
     # via
     #   -c requirements/common-constraints.txt
     #   altair
-numpy==1.26.4
+numpy==2.2.4
     # via
     #   -c requirements/common-constraints.txt
     #   pandas
@@ -143,7 +143,6 @@ typing-extensions==4.13.2
     # via
     #   -c requirements/common-constraints.txt
     #   altair
-    #   referencing
     #   streamlit
 tzdata==2025.2
     # via

requirements/requirements-dev.txt

@@ -143,7 +143,7 @@ nodeenv==1.9.1
     # via
     #   -c requirements/common-constraints.txt
     #   pre-commit
-numpy==1.26.4
+numpy==2.2.4
     # via
     #   -c requirements/common-constraints.txt
     #   contourpy
@@ -309,3 +309,7 @@ wheel==0.45.1
     # via
     #   -c requirements/common-constraints.txt
     #   pip-tools
+
+# The following packages are considered to be unsafe in a requirements file:
+# pip
+# setuptools

requirements/requirements-help.in

@@ -1,11 +1,11 @@
 llama-index-embeddings-huggingface
 
-# Because sentence-transformers doesn't like >=2
-numpy<2
+# sentence-transformers 4 requires numpy 2 (indirectly through scipy 1.14 which dropped Python 3.9 support)
+numpy>=2
 
-# Mac x86 only supports 2.2.2
+# Drop Mac x86 support
 # https://discuss.pytorch.org/t/why-no-macosx-x86-64-build-after-torch-2-2-2-cp39-none-macosx-10-9-x86-64-whl/204546/2
-torch==2.2.2
+torch>2.2.2
 
 # Later versions break test_help in GitHub Actions on Windows and Ubuntu
-llama-index-core==0.12.26
+llama-index-core==0.12.26

requirements/requirements-help.txt

@@ -172,7 +172,7 @@ nltk==3.9.1
     # via
     #   -c requirements/common-constraints.txt
     #   llama-index-core
-numpy==1.26.4
+numpy==2.2.4
     # via
     #   -c requirements/common-constraints.txt
     #   -r requirements/requirements-help.in
@@ -273,7 +273,7 @@ tokenizers==0.21.1
     # via
     #   -c requirements/common-constraints.txt
     #   transformers
-torch==2.2.2
+torch==2.6.0
     # via
     #   -c requirements/common-constraints.txt
     #   -r requirements/requirements-help.in
@@ -293,7 +293,6 @@ transformers==4.51.3
 typing-extensions==4.13.2
     # via
     #   -c requirements/common-constraints.txt
-    #   anyio
     #   huggingface-hub
     #   llama-index-core
     #   pydantic
@@ -325,3 +324,6 @@ yarl==1.20.0
     # via
     #   -c requirements/common-constraints.txt
     #   aiohttp
+
+# The following packages are considered to be unsafe in a requirements file:
+# setuptools

requirements/tree-sitter.in

@@ -1,3 +1,2 @@
-    
 tree-sitter==0.23.2; python_version < "3.10"
 tree-sitter==0.24.0; python_version >= "3.10"